Package index • plotthis

Plotting

Functions for plotting

SankeyPlot() AlluvialPlot(): Sankey / Alluvial Plot
AreaPlot(): Area plot
BarPlot() SplitBarPlot() WaterfallPlot(): Bar / SplitBar / Waterfall Plot
BoxPlot() ViolinPlot() BeeswarmPlot(): Box / Violin / Bar / Beeswarm plot
ChordPlot() CircosPlot(): Chord / Circos plot
ClustreePlot(): Clustree Plot
CorPlot(): Correlation scatter plot
CorPairsPlot(): Correlation pairs (scatterplot matrix)
DensityPlot() Histogram(): Density Plot / Histogram
DimPlot() FeatureDimPlot(): DimPlot / FeatureDimPlot
DotPlot() LollipopPlot(): Dot Plot, Scatter Plot, and Lollipop Plot
EnrichMap() EnrichNetwork(): Enrichment Map and Enrichment Network
GSEASummaryPlot() GSEAPlot(): GSEA summary dot plot
Heatmap(): Heatmap
JitterPlot(): Jitter plot
LinePlot(): Line plot
LinkedHeatmap(): Linked Heatmap
ManhattanPlot(): Manhattan plot
Network(): Network
QQPlot(): QQ/PP plot
RidgePlot(): Ridge Plot
PieChart(): Pie chart
RadarPlot() SpiderPlot(): Radar plot / Spider plot
RarefactionPlot(): Rarefaction / extrapolation plot
RingPlot(): Ring plot (multi-layer donut chart)
ROCCurve(): ROC curve
ScatterPlot(): Scatter Plot
SpatImagePlot() SpatMasksPlot() SpatShapesPlot() SpatPointsPlot(): Spatial visualization functions for terra objects and point data
TrendPlot(): Trend plot
VelocityPlot(): Cell velocity plot
VolcanoPlot(): Volcano plot
WordCloudPlot(): Word cloud plot
UpsetPlot(): UpSet Plot
VennDiagram(): Venn / Euler diagram

Theming

Functions for plot theming

palette_this(): Color palettes collected in plotthis.
theme_this(): A ggplot2 theme and palettes for plotthis Borrowed from the theme_this function in the SCP pipeline
theme_blank(): Blank theme
theme_box(): Box theme
show_palettes(): Show the color palettes
element_textbox() element_grob(<element_textbox>): Theme element that add a box to the text

Data

Built-in data for plotting or examples

enrich_example: An example of clusterProfiler enrichment result
enrich_multidb_example: An example of clusterProfiler enrichment result with multiple databases
gsea_example: An example of GSEA result from fgsea package
palette_list: A list of palettes for use in data visualization
words_excluded: Excluded words in keyword enrichment analysis and extraction
dim_example: An example data for dimensionality reduction plot