Publication Quality Plots for Single Cell Data Analysis • scplotter

scplotter is an R package that is built upon plotthis. It provides a set of functions to visualize single-cell sequencing data in an easy and efficient way.

Installation

remotes::install_github("pwwang/scplotter")
# or
devtools::install_github("pwwang/scplotter")
# or using conda
$ conda install pwwang::r-scplotter

Credits

scplotter draws significant inspiration from the SCP package, which separates visualization from analysis and implements it in the plotthis package. Building on plotthis, scplotter offers advanced functions for visualizing single-cell sequencing data. Special thanks to the scRepertoire package for its APIs that facilitate the analysis of single-cell TCR/BCR sequencing data.