The dataset is generated using python package LIANA
Examples
if (FALSE) { # \dontrun{
# Python code
# # import liana
# import liana as li
# # needed for visualization and toy data
# import scanpy as sc
#
# from liana.method import cellphonedb
# adata = sc.datasets.pbmc68k_reduced()
# cellphonedb(adata,
# groupby='bulk_labels',
# # NOTE by default the resource uses HUMAN gene symbols
# resource_name='consensus',
# expr_prop=0.1,
# verbose=True, key_added='cpdb_res')
# cellphonedb_res = adata.uns['cpdb_res']
# cellphonedb_res = cellphonedb_res[cellphonedb_res['cellphone_pvals'] < 0.05]
} # }