Function reference • hitype

Cell type scoring and assignment with Hitype

gs_prepare(): Prepare gene sets for hitype

hitype_score(): Calculate cell type scores

hitype_assign(): Generate scores for cell types for each level

RunHitype(): Run hitype_assign for a Seurat object

Marker weight training

train_weights(): Train weights for the markers

Summarizing Hitype results

summary(<hitype_result>): Summarize the hitype_result object

print(<hitype_result>): Print the summary of the hitype_result object