One row per cell type, with the positive and negative markers
collapsed into comma-separated geneSymbolmore1/geneSymbolmore2 columns.
Usage
markers_to_sctype_df(df, tissue = NULL, cancer = NULL, species = NULL)
Arguments
- df
A canonical marker table.
- tissue
The tissue to filter by. If NULL, no filtering is done.
- cancer
The cancer to filter by. If NULL, no filtering is done.
- species
The species to filter by. If NULL, no filtering is done.
Value
A data.frame in the ScType format.