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Convert a marker table to the python wrappers' marker file format

Source: R/scrna-markers.R
markers_to_scsa_df.Rd

A headerless two-column table of the cell types and their genes, as taken by the -m/--marker of the python wrappers (scsa, maca, scmapnet). Only positive markers are kept (the format has no direction).

Usage

markers_to_scsa_df(df)

Arguments

df

A canonical marker table.

Value

A data.frame with cellName and gene columns.