Run data integration on Seurat object

Run data integration on Seurat object

Usage

RunSeuratIntegration(
  object,
  no_integration = FALSE,
  IntegrateLayersArgs = list(),
  log = NULL,
  cache = NULL
)

Arguments

object

Seurat object

no_integration

Whether to skip integration, just join layers

IntegrateLayersArgs

Arguments to pass to Seurat::IntegrateLayers

log

Logger

cache

Directory to cache the results. Set to FALSE to disable caching

Value

The Seurat object with integrated data