Convert an AnnData file (h5ad) to a Seurat object or an RDS/qs2 file
Usage
ConvertAnnDataToSeurat(infile, outfile = NULL, assay = "RNA", log = NULL)
Arguments
- infile
Input file
- outfile
Output file. If "NULL" (default) is given, a temporary file will be created
and saved and the Seurat object will be read from it.
- assay
Assay naem to save in the Seurat object
- log
Logger
Value
The Seurat object if outfile is "